Find hotels near Mission Bay, San Diego from CA $139

    Plan, book, stay with confidence
    bex rewards loyalty icon
    Be picky
    Search almost a million properties worldwide
    payments icon
    Treat yourself
    Sign in to save 10% or more on thousands of hotels
    today icon
    Change your mind
    Book hotels with free cancellation

Filter by

Popular filters
Popular filters
Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Area
Area
Popular locations
1
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveller experience
Traveller experience

Top Hotels Close to Mission Bay

Paradise Point Resort & Spa
4.0 star property
8.4 out of 10, Very good, 1,834 reviews
"From the moment we stepped foot on the property, we were greeted with friendliness. The staff is eager to help all the time. The rooms were great and anytime we had an issue we called the front desk and they always fixed it promptly. We loved the duck food to feed the ducks for the kids. We loved the coffee shop on site and we walked to it every morning. We loved that the hotel was centrally located. This is the most perfect place to stay if you have a family with small children. The property...
The price is CA $388
CA $499 total
includes taxes & fees
Jun 11 - Jun 12
Paradise Point Resort & Spa
Wyndham Garden San Diego Near SeaWorld
3.0 star property
7.2 out of 10, Good, 2,739 reviews
"A friendly gentleman immediately greeted me upon entering the lobby. I booked and checked in online so receiving our room key and parking pass was quick. He provided clear direction to our building and room. The room was clean, updated, and smelled clean. Towels, linens, and the room was clean."
The price is CA $190
CA $214 total
includes taxes & fees
Jun 9 - Jun 10
Wyndham Garden San Diego Near SeaWorld
The Dana on Mission Bay
3.5 star property
8.8 out of 10, Excellent, 2,544 reviews
"Wonderful stay"
The price is CA $245
CA $276 total
includes taxes & fees
Jun 12 - Jun 13
The Dana on Mission Bay
Save an average of 15% on thousands of hotels when you're signed in
DoubleTree by Hilton San Diego - Hotel Circle
4.0 star property
7.4 out of 10, Good, 1,563 reviews
"Staff was exceptionally helpful and accommodating "
The price is CA $192
CA $216 total
includes taxes & fees
Jun 9 - Jun 10
DoubleTree by Hilton San Diego - Hotel Circle
California Suites Hotel
2.0 star property
7.0 out of 10, Good, 1,367 reviews
"Quiet and comfortable place to rest."
The price is CA $139
CA $156 total
includes taxes & fees
Jun 12 - Jun 13
California Suites Hotel
San Diego Mission Bay Resort
4.0 star property
8.2 out of 10, Very good, 1,026 reviews
"Pillows are terrible, everything else was great. "
The price is CA $363
CA $470 total
includes taxes & fees
Jun 12 - Jun 13
San Diego Mission Bay Resort
Mission Bay Inn San Diego
2.5 star property
7.4 out of 10, Good, 1,023 reviews
"The property was close to a lot of things. It was also near the beaches. I like that they had a good breakfast. The staff were super helpful."
The price is CA $156
CA $176 total
includes taxes & fees
Jun 12 - Jun 13
Mission Bay Inn San Diego
Legacy Resort Hotel & Spa
4.0 star property
9.0 out of 10, Wonderful, 2,881 reviews
"Staff service was good. Not likely friendly."
The price is CA $287
CA $323 total
includes taxes & fees
Jun 9 - Jun 10
Legacy Resort Hotel & Spa
The Wayfarer San Diego
4.0 star property
9.2 out of 10, Wonderful, 1,090 reviews
"Absolutely phenomenal experience"
The price is CA $436
CA $492 total
includes taxes & fees
Jun 9 - Jun 10
The Wayfarer San Diego
Ocean Beach Hotel
2.0 star property
8.4 out of 10, Very good, 1,297 reviews
"This is not a bad review. This place is great! Awesome location. Great staff. But it is dated and lacks what anyone would consider “luxury”. We will stay again! But don’t expects the Ritz or 4 seasons "
The price is CA $370
CA $409 total
includes taxes & fees
Jun 9 - Jun 10
Ocean Beach Hotel
Hyatt Regency Mission Bay Spa and Marina
4.0 star property
8.4 out of 10, Very good, 1,434 reviews
"Great stay "
The price is CA $245
CA $336 total
includes taxes & fees
Jun 20 - Jun 21
Hyatt Regency Mission Bay Spa and Marina
Bahia Resort Hotel
3.5 star property
8.6 out of 10, Excellent, 1,321 reviews
"Front desk guy that checked us is was very nice. He was very attention to detailed and was focus on out needs for a conferrable stay at Bahia Resort Hotel."
The price is CA $324
CA $432 total
includes taxes & fees
Jun 13 - Jun 14
Bahia Resort Hotel
Catamaran Resort and Spa
4.0 star property
7.8 out of 10, Good, 1,108 reviews
"The Catamaran has a gorgeous lobby and grounds and makes you feel like you are in Hawaii without 5 hour flight. The room decor is a bit dated but very comfortable. The restaurants had tasty food and drinks, especially brunch. "
The price is CA $381
CA $498 total
includes taxes & fees
Jun 9 - Jun 10
Catamaran Resort and Spa
La Quinta Inn & Suites by Wyndham San Diego Mission Bay
3.0 star property
8.0 out of 10, Very good, 1,157 reviews
"I loved to stay at this place. The staff and breakfast are awesome. The room is comfortable and equiped. My allergies to dust came but everything else nice. "
The price is CA $201
CA $226 total
includes taxes & fees
Jun 9 - Jun 10
La Quinta Inn & Suites by Wyndham San Diego Mission Bay
The Beach Cottages
2.5 star property
9.2 out of 10, Wonderful, 1,000 reviews
"We love coming here every summer. I love that they send texts to keep us informed. "
The Beach Cottages
La Jolla Cove Suites
3.0 star property
7.2 out of 10, Good, 1,014 reviews
"The best view"
The price is CA $219
CA $246 total
includes taxes & fees
Jun 9 - Jun 10
La Jolla Cove Suites
Kings Inn San Diego
2.5 star property
8.8 out of 10, Excellent, 2,729 reviews
"Hotel was very cute with a 50’s surfer decor. Clean and comfortable. The staff was outstanding "
The price is CA $147
CA $165 total
includes taxes & fees
Jun 10 - Jun 11
Kings Inn San Diego
Ocean Villa Inn
2.5 star property
8.2 out of 10, Very good, 1,010 reviews
" We stayed the hotel about 3times now. We love how close to the beach, the pool is well heated, and staff were very nice. "
The price is CA $183
CA $203 total
includes taxes & fees
Jun 9 - Jun 10
Ocean Villa Inn
La Jolla Shores Hotel
3.0 star property
8.8 out of 10, Excellent, 1,265 reviews
"N/A"
The price is CA $479
CA $589 total
includes taxes & fees
Jun 23 - Jun 24
La Jolla Shores Hotel
Comfort Inn San Diego Old Town
2.5 star property
7.8 out of 10, Good, 1,018 reviews
"The rooms were clean and comfortable. The front desk check in was fast and convenient. The front desk personnel were friendly and helpful. The grounds are well maintained. Spent only one night prior to flying home so very conveniently located near airport."
The price is CA $176
CA $199 total
includes taxes & fees
Jun 9 - Jun 10
Comfort Inn San Diego Old Town
Don't see what you're looking for?
See all available properties in Mission Bay
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Hotels near Other San Diego Attractions

Frequently asked questions

What's the area like around Mission Bay?

Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, check out the 64 hotels and other accommodations you'll find within a mile.

Where is the best place to stay near Mission Bay?

Paradise Point Resort & Spa is one of the top choices for your stay based on our traveler data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.7 mi (1.2 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 1 mi (1.6 km) away.

How many hotels can I expect to find close to Mission Bay?

Expedia has 64 hotels and other accommodations within a mile from Mission Bay.

If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?

Yes! You'll find that most hotel bookings are fully refundable provided that you cancel before the hotel’s cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If your reservation is non-refundable, you may still be able to cancel and be given a refund within 24 hours of booking. Enter your dates, click on "Search", then filter by "fully refundable" to review the top deals on offer near Mission Bay.

Where can I learn more about changing or cancelling my trip in the area near Mission Bay?

For more details about picking new dates or cancelling your stay near Mission Bay, head over to our customer service page.

What can I see and do near Mission Bay?

Study the collections at Maritime Museum of San Diego, Whaley House Museum, or Junipero Serra Museum. Casa de Machado y Stewart, McCoy Museum House, and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company, and Red Spade Theater.

Recent Reviews in Mission Bay
Expedia verified reviews